IPMC Dataset isoswitch-report (D537)
UMAP
Marker search
Pairwise comparaison of all clusters
clusters <- levels(adult@active.ident)
markers_hc20_nomin <- ISO_SWITCH_ALL(adult, clusters, assay="multi", min.pct=0, logfc.threshold=0.40, verbose=TRUE)
Marker split per cell type:
Zoom deuterosomal vs basal
Overall, 141 distinct genes with isoform-switches were found (lowest adj p-value shown per gene):
Isoform switches
394 isoform switches found:
Gene reports (top 25)
Outer names are only allowed for unnamed scalar atomic inputs
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RmlnNyBIWUFMMgoKaHlhbDIgPC1pc29zd2l0Y2hfcmVwb3J0KGFkdWx0LCAibXVsdGkiLCBnZW5lPSJIWUFMMiIsIG1hcmtlcl9saXN0PW1hcmtlcnNfaGMyMF9ub21pbikgCmh5YWwyCmdnc2F2ZSgiRmlnN19oeWFsMi5wbmciLCBwbG90PWh5YWwyLCBkZXZpY2U9InBuZyIsIHdpZHRoPTEwLCBoZWlnaHQ9NiwgdW5pdHM9ImluIiwgZHBpPTMwMCwgdHlwZT0iY2Fpcm8iKQojIHBsb3Rfc3dpdGNoZXMoYWR1bHQsIHMpIApgYGAKCg==